Search Section

Filter your search using the following options:

1. Sample Type

• MAG (Metagenome-Assembled Genomes): Genomes reconstructed from metagenomic data.

• Metagenome: Results of metagenomic samples.

• Plant Disease: Data related to pathogenic plant-microbe interactions.

2. Available Plants

Select a plant from the dropdown menu after choosing a sample type.

3. Run Query

Enter a Run ID directly to retrieve your results.

Click Consult to execute your search.

Search Examples

By MAG

Follow these steps to explore Metagenome-Assembled Genomes (MAGs):

1. Select “MAG” as the sample type.

2. Choose a plant (e.g., Soya bean) from the dropdown.

3. Click Consult to view results.

The results will display a table of MAGs, including details such as BIN ID, HOST NAME, SAMPLE, PLANT PART, COMPLETENESS, CONTAMINATION, etc.

By Metagenome

Follow these steps to explore Metagenome:

1. Select “Metagenome” as the sample type.

2. Choose a plant (e.g., Sunflower) from the dropdown.

3. Click Consult to view results.

The results will display two tables:

• Samples: Contains sample metadata such as SAMPLE, HOST NAME, PLANT PART, ASSAY_TYPE, etc.

• Comparative table: Contains detailed data on microbial presence and abundance, including NAME, RANK, TID, MAX, RELATIVE ABUNDANCE of each sample, etc.

By Plant Disease

Follow these steps to explore Plant Disease data:

1. Select “Plant Disease” as the sample type.

2. Choose a plant (e.g., Apple) from the dropdown.

3. Click Consult to view results.

The results will display a table of plant disease data, including PLANT, DISEASE, PATHOGEN and TAXID.